| chrLoc | Data for examples |
| data | Data for examples |
| logOR | Data for examples |
| logR | Data for examples |
| subHMM | The SubHMM Model for Identifying Tumor Subclones |
| subhmm | The SubHMM Model for Identifying Tumor Subclones |
| subhmm_stage2 | Stage 2 of the SubHMM Model for Identifying Tumor Subclones |