TREAT (TREe-based Association Test)

TREAT (TREe-based Association Test) version 0.0.5 is an R package for detecting complex joint effects in case-control studies. The test statistic is derived from a tree-structure model by recursive partitioning the data. Ultra-fast algorithm is designed to evaluate the significance of association between candidate gene and disease outcome.

• Manual
• Vignette
• License Agreement

Download Software

Note: TREAT is designed for 64-bit OS ONLY. Please DO NOT run it on a 32-bit OS, which might give incorrect results.

• Package Source - TREAT.0.0.5.tar.gz
• Windows Binary - TREAT.0.0.5.zip

Reference

Zhang H, Wheeler W, Wang ZM, Taylor PR, Yu K. A fast and powerful tree-based association test for detecting complex joint effect in case-control studies. Bioinformatics 2014

Support

Questions? Contact Dr. Kai Yu